SEQUENCE THE COMPLETE GENOME OF COVID-19 DIRECTLY AND AT LOW COST FROM PREPARED RNA SAMPLES FROM PATIENTS (CAPTURE-COV project)

  • Funded by Institut Pasteur International Network (IPIN)
  • Total publications:240 publications

Grant number: Unknown

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Key facts

  • Disease

    COVID-19
  • Funder

    Institut Pasteur International Network (IPIN)
  • Principal Investigator

    N/A

  • Research Location

    N/A
  • Lead Research Institution

    N/A
  • Research Priority Alignment

    N/A
  • Research Category

    Pathogen: natural history, transmission and diagnostics

  • Research Subcategory

    Pathogen genomics, mutations and adaptations

  • Special Interest Tags

    N/A

  • Study Type

    Non-Clinical

  • Clinical Trial Details

    N/A

  • Broad Policy Alignment

    Pending

  • Age Group

    Not Applicable

  • Vulnerable Population

    Not applicable

  • Occupations of Interest

    Not applicable

Abstract

to be able to sequence the complete genome of Covid-19 directly and at low cost from prepared RNA samples from patients. We plan to implement a capture sequencing protocol targeting the SARS-CoV-2 genome using three commercial sets of probes in parallel. Results will be compared with a bioinformatics analysis pipeline and shared via publication (Biorxiv preprint followed by classical peer review).

Publicationslinked via Europe PMC

Last Updated:43 minutes ago

View all publications at Europe PMC

Dysregulated Alternative Splicing in Breast Cancer Subtypes of RIF1 and Other Transcripts.

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